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MAG info file description
nnnagara edited this page Jun 29, 2020
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Column name | Description |
---|---|
MAG_ID | MAG identifier |
Quality | MAG quality status (HIGH, MEDIUM) |
Completeness | CheckM completeness value |
Contamination | CheckM contamination value |
Size | Sequence size |
#_contigs | Number of contigs |
Contig_N50 | Contig N50 |
Longest_contig | Longest contig length |
Closest_GTDB_species | Species name of the closest genome in GTDB |
Closest_GTDB_genome | Closest genome in GTDB |
Distance_to_closest_GTDB_genome | Mash distance of the closest GTDB genome |
Closest_MAG | Closest MAG in the reference databases |
Distance_to_closest_MAG | Mash distance of the closest MAG |
Novel_status | Novel MAG status (KNOWN, NOVEL) |
Novel_species_ID | Cluster ID of novel MAG (NA if KNOWN MAG) |