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Contig info file description

dbertran78 edited this page Jul 29, 2019 · 2 revisions
Column name Description
CONTIG_ID contig identifier
LENGTH length
SHORT_READ_COV average short-read coverage
LONG_READ_COV average long-read coverage
CLUSTER OPERA-MS cluster that the contig belongs to
SPECIES closest reference species in OPERA-MS database for the assembled contig (identified using Mash)
NB_STRAIN number of strains detected by OPERA-MS for this species
REFERENCE_GENOME species reference ID
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