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A document for the Living Journal of Computational Molecular Science (LiveCoMS) which describes basic training for molecular simulations (oriented towards molecular dynamics (MD)), providing some t…

TeX 109 19 Updated Dec 29, 2018

🍇 Grape-Academic-Theme: A modified version of the Jekyll Grape-Theme for an academic Portfolio. (Can include a blog)

SCSS 39 62 Updated Feb 8, 2024

A minimal Jekyll Theme to host your resume (CV) on GitHub with a few clicks.

JavaScript 3,125 5,923 Updated Aug 19, 2024

Scripts I create or borrow that make my life easier

Python 1 Updated Aug 13, 2024
Python 2 Updated Jul 26, 2022

Python client for the Imply Polaris hosted Druid offering

Python 3 Updated Mar 10, 2022
Python 1 Updated Dec 14, 2021
Python 1 Updated Dec 7, 2021

Apache Druid: a high performance real-time analytics database.

Java 13,409 3,684 Updated Sep 19, 2024

Comparison benchmarks between public force fields and Open Force Field Initiative force fields

Python 10 2 Updated Nov 2, 2022

Issues found on WSL

PowerShell 17,258 812 Updated Sep 19, 2024

Easily generate flowcharts and diagrams from text ⿻

TypeScript 3,131 228 Updated Sep 16, 2024

Accelerating new GitHub Actions workflows

TypeScript 8,963 5,207 Updated Sep 17, 2024

Syntax checking hacks for vim

Vim Script 11,298 1,136 Updated Jul 10, 2022

A vim plugin to display the indention levels with thin vertical lines

Vim Script 4,141 227 Updated Jul 14, 2023

Transforms literary/philosophical texts into patent applications

Python 358 44 Updated May 18, 2014

A collection of ORM-style clients to public patent data

Python 84 34 Updated Aug 6, 2024

Learn JavaScript by adventuring around in the terminal.

JavaScript 2,857 1,046 Updated Jun 16, 2024

Toolkit to aid in the analysis of lipid bilayer molecular simulation trajectories.

Python 24 10 Updated May 12, 2021

A bot that applies OpenFF software best practices

Ruby 1 Updated Feb 14, 2020

Python-centric Cookiecutter for Molecular Computational Chemistry Packages

Python 384 89 Updated Sep 3, 2024

Educational materials for, and related to, UC Irvine's Drug Discovery Computing Techniques course (PharmSci 175/275), currently taught by David Mobley.

Jupyter Notebook 141 42 Updated Feb 28, 2024

chemalot: a command-line cheminformatics open-source package

Java 37 6 Updated Jun 4, 2023

Best Practices article intended for LiveCoMS

TeX 36 5 Updated Dec 17, 2019

REST Implementation in NAMD

C 4 4 Updated Dec 7, 2015

Two day workshop on introductory Python and predictive modeling.

Jupyter Notebook 3 5 Updated Aug 15, 2017

Run singularity containers on the Comet Supercomputer at San Diego Supercomputer Center

Shell 18 3 Updated Jul 25, 2020

SDSC Summer Institute 2017 teaching material

HTML 17 25 Updated Jul 12, 2018
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