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DeepSurv is a deep learning approach to survival analysis.
DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing data.
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
S2ORC: The Semantic Scholar Open Research Corpus: https://www.aclweb.org/anthology/2020.acl-main.447/
📄 🤖 Semantic search and workflows for medical/scientific papers
📄 ⚙️ ETL processes for medical and scientific papers
Python package for graph statistics
List of software packages for multi-omics analysis
Machine Learning University: Accelerated Tabular Data Class
The Learning Path and Comprehensive List of Materials from Data Science
This repo contains code+pre-trained models for extracting information from camera-trap images. The pre-trained models have been trained on the Snapshot Serengeti dataset.
Approaching (Almost) Any Machine Learning Problem
Machine Learning in Biotechnology using Python, published by Packt
de novo Transcriptome assembly of viruses from honeybee and Andrena species using trinityrnaseq
A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
{package} The easy way to create raincloud plots
Statistical Rethinking Course Winter 2020/2021
Working in R looking at data produced by codeml runs in Project 0
An interactive web-tool for RNA-seq analysis
PCAtools: everything Principal Components Analysis
Publication-ready volcano plots with enhanced colouring and labeling
Beaker Extensions for Jupyter Notebook
phyloFlash - A pipeline to rapidly reconstruct the SSU rRNAs and explore phylogenetic composition of an illumina (meta)genomic dataset.