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A collections of scripts for working molecular dynamics simulations

Python 37 20 Updated May 24, 2024

Interfacing RDKit and AutoDock

Python 190 46 Updated Sep 19, 2024

a pipeline for running MD simulations in the presence of probe molecules for druggability assessment

Python 11 1 Updated Mar 6, 2024

Ligand Binding Site detection using Deep Learning

Python 89 26 Updated Sep 19, 2024

A Machine Learned Molecular Mechanics Force Field with integration into GROMACS and OpenMM

Python 33 Updated Sep 20, 2024

Evaluation of physicochemical and ADMET properties as an important stage of the drug design process – prediction, interpretation, and optimization

Jupyter Notebook 12 2 Updated Nov 23, 2023