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Commits on Jun 30, 2022

• Updated macs_gsize on igenomes and add a process to calculate it if not available

  JoseEspinosa

  committedJun 30, 2022
  69c8db1

Commits on Mar 30, 2022

• Add chromap as mapper

  JoseEspinosa

  committedMar 30, 2022
  2e3af0d

Commits on Mar 2, 2022

• Fix merge conflicts

  drpatelh

  committedMar 2, 2022
  bcd1213

• Template update for nf-core/tools version 2.3.dev0

  drpatelh

  committedMar 2, 2022
  66bfcfc

Commits on Jan 25, 2022

• Discard by the moment chromap

  JoseEspinosa

  committedJan 25, 2022
  2e81cdc

Commits on Jan 20, 2022

• Add check for params.aligner in initialize function

  JoseEspinosa

  committedJan 20, 2022
  ff4dd74

Commits on Jan 18, 2022

• Add bowtie2 as aligner

  JoseEspinosa

  committedJan 18, 2022
  74e0148

Commits on Oct 22, 2021

• First pass updates

  drpatelh

  committedOct 22, 2021
  909470e

Commits on Sep 15, 2021

• Get rid of readme param

  JoseEspinosa

  committedSep 15, 2021
  387e589

Commits on Sep 9, 2021

• Merge remote-tracking branch 'upstream/nf-core-template-merge-2.1' into dev_merge_template_2.1

  JoseEspinosa

  committedSep 9, 2021
  aa7e3c4

Commits on Jul 13, 2021

• Template update for nf-core/tools version 2.0

  KevinMenden

  committedJul 13, 2021
  e201a4e

Commits on May 11, 2021

• Template update for nf-core/tools version 1.14

  nf-core-bot

  committedMay 11, 2021
  769a517

Commits on Mar 18, 2021

• Template update for nf-core/tools version 1.13

  nf-core-bot

  committedMar 18, 2021
  87b2a24

Commits on Dec 3, 2020

• Template update for nf-core/tools version 1.12.1

  nf-core-bot

  committedDec 3, 2020
  2c702d1

Commits on Nov 23, 2020

• Replace baseDir with projectDir

  drpatelh

  committedNov 23, 2020
  bfdb32e

Commits on Nov 19, 2020

• Template update for nf-core/tools version 1.12

  nf-core-bot

  committedNov 19, 2020
  120953a

Commits on Aug 5, 2020

• Switch to nf-core/modules

  drpatelh

  committedAug 5, 2020
  d5efb1c

• Change module paths

  drpatelh

  committedAug 5, 2020
  f92b2ae

Commits on Aug 4, 2020

• Remove options if default value alreadty

  drpatelh

  committedAug 4, 2020
  b3d4943

Commits on Aug 3, 2020

• Get pipeline working from end-to-end again. Woohoooooo

  drpatelh

  committedAug 3, 2020
  cdb59d9

• Update all modules

  drpatelh

  committedAug 3, 2020
  bed40b3

• Use task.process

  drpatelh

  committedAug 3, 2020
  8c4a41f

• Comment out for testing

  drpatelh

  committedAug 3, 2020
  6150739

• Use groovy funcs for publishing

  drpatelh

  committedAug 3, 2020
  bded91f

Commits on Jul 31, 2020

• Fix MultiQC report

  drpatelh

  committedJul 31, 2020
  454c0dd

• Add custom annotatepeaks to MultiQC

  drpatelh

  committedJul 31, 2020
  85570fc

• Add in custom peaks

  drpatelh

  committedJul 31, 2020
  b0e311c

• Add in first batch of custom MultiQC custom content

  drpatelh

  committedJul 31, 2020
  2906eb5

• Template update for nf-core/tools version 1.10.2

  nf-core-bot

  committedJul 31, 2020
  4e763e1

• Add in SPP process

  drpatelh

  committedJul 31, 2020
  2b4006b

• Add in first pass IGV

  drpatelh

  committedJul 31, 2020
  0d27926

• Update schema

  drpatelh

  committedJul 31, 2020
  8918c1d

Commits on Jul 30, 2020

• Dummy commit

  drpatelh

  committedJul 30, 2020
  b13fda8

• Template update for nf-core/tools version 1.10.1

  nf-core-bot

  committedJul 30, 2020
  1fd168a

• Fix featurecounts

  drpatelh

  committedJul 30, 2020
  ab08373

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