Accurate and Efficient Simulation of CyTOF data

SeaweedFS is a fast distributed storage system for blobs, objects, files, and data lake, for billions of files! Blob store has O(1) disk seek, cloud tiering. Filer supports Cloud Drive, cross-DC ac…

Visual exploratory analysis of gene expression data

A Docker app to run Nanostring GeoMx Workflows

Chat with your documents. Upload anything, get answers.

Docker image for the Pleroma federated social network

Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.

An open platform for training, serving, and evaluating large language models. Release repo for Vicuna and Chatbot Arena.

function calling-based LLM agents

A programming framework for agentic AI 🤖

Test your prompts, agents, and RAGs. Red teaming, pentesting, and vulnerability scanning for LLMs. Compare performance of GPT, Claude, Gemini, Llama, and more. Simple declarative configs with comma…

HFT market making client for openbook-dex

OME model (specification, code generator, implementation)

Raw format to OME-TIFF converter

Bio-Formats image file format to raw format converter

Script to generate OME-TIFF

Minimum Information about Tissue Imaging

Circular visualization in R

A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.

Unp4k utilities for Star Citizen

Python client for IONpath MIBItracker API, plus utility functions for working with MIBItiff images.

A small application to facilitate markup of multi-channel images

napari: a fast, interactive, multi-dimensional image viewer for python

Isoform Detection and Prediction, and Alternative PolyAdenylation site analysis

Multiple correspondence analysis

TensorFlow CNN for fast style transfer ⚡🖥🎨🖼