adding adam-dev (git head)

README.md

@@ -2,11 +2,12 @@
 Docker images of bioinformatics software built with [Linuxbrew](http://brew.sh/linuxbrew/).
 
  * docker pull [heuermh/adam](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/adam)
+ * docker pull [heuermh/adam-dev](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/adam-dev)
  * docker pull [heuermh/apache-spark](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/apache-spark)
  * docker pull [heuermh/apache-spark141](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/apache-spark141)
  * docker pull [heuermh/apache-spark131](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/apache-spark131)
  * docker pull [heuermh/apache-spark121](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/apache-spark121)
  * docker pull [heuermh/freebayes](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/freebayes)
- * docker pull [heuermh/nextflow](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/snpeff)
+ * docker pull [heuermh/nextflow](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/nextflow)
  * docker pull [heuermh/snpeff](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/snpeff)
  * docker pull [heuermh/vep](https://github.com/heuermh/docker-linuxbrew-bio/tree/master/vep)

adam-dev/Dockerfile

@@ -0,0 +1,5 @@
+FROM heuermh/apache-spark
+MAINTAINER Michael Heuer <heuermh@acm.org>
+
+RUN brew tap homebrew/science \
+  && brew install --HEAD adam

adam-dev/README.md

@@ -0,0 +1,4 @@
+# [ADAM](https://github.com/bigdatagenomics/adam) development Docker image
+Docker image of [ADAM](https://github.com/bigdatagenomics/adam) development built with [Linuxbrew](http://brew.sh/linuxbrew/).
+
+ * docker pull [heuermh/adam-dev](https://registry.hub.docker.com/u/heuermh/adam-dev/)

adam/Dockerfile

@@ -1,14 +1,5 @@
 FROM heuermh/apache-spark
 MAINTAINER Michael Heuer <heuermh@acm.org>
 
-# see https://github.com/bigdatagenomics/adam/issues/747
-# RUN brew tap homebrew/science
-# RUN brew install adam
-
-RUN brew install maven \
-  && cd /home/linuxbrew \
-  && git clone https://www.github.com/bigdatagenomics/adam.git \
-  && cd adam \
-  && mvn clean package -DskipTests
-
-ENV PATH /home/linuxbrew/adam/bin:$PATH
+RUN brew tap homebrew/science \
+  && brew install adam

nextflow/Dockerfile

@@ -2,4 +2,5 @@ FROM sjackman/linuxbrew
 MAINTAINER Michael Heuer <heuermh@acm.org>
 
 RUN brew tap homebrew/science \
-  && brew install nextflow
+  && brew install nextflow \
+  && nextflow -version