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Fix some errors introduced by PR #151 #153

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merged 5 commits into from
Mar 10, 2023
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@andthum andthum commented Mar 10, 2023

Fix some errors introduced by PR #151

Type of change

  • Change of core package.
  • Change of scripts.
  • Bug fix.
  • New feature.
  • Code refactoring.
  • Dependency update.
  • Documentation update.
  • Maintenance.
  • Other: Description.
  • Non-breaking (backward-compatible) change.
  • Breaking (non-backward-compatible) change.

PR checklist

  • I followed the guidelines in the Developer's guide.
  • New/changed code is properly tested.
  • New/changed code is properly documented.
  • The CI workflow is passing.

Change `prune **/_sphinx_autosummary` to `prune **/_sphinx_autosummary*`
* Remove `nargs=2` from `--weights` argument, because it should only
  require and accept one argument.

* Fix formatting of the header of the output file.
Explicitly copy the values from the arrays of the current time step to
the arrays of the previous time step to avoid errors arising from the
fact that Python handles everything as reference if possible.
In the function `mdtools.box.unwrap_frame`, change the examples/test for
the `out` and `out_tmp` arguments from examples with constant boxes to
changing boxes.

Fix a wrong doc sentence.
@github-actions github-actions bot added bugfix Pull requests that fix a bug patch Change that results in a new patch version labels Mar 10, 2023
@andthum andthum merged commit 6738d00 into main Mar 10, 2023
@andthum andthum deleted the fix/trajectory-unwrapping-fix branch March 10, 2023 14:22
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