Python and R codes used for the pattern recognition discipline @ USP using microarray RNA expression data obtained from breast cancer patients that had mutations in the BRACA1 or the BRACA2 genes.
- Linear Regression: Mean Square Error (MSE) classifier
- Finding linearly separable gene pairs using linear programming constraint solvers
- Support vector machines: Maximum margin
- Support vector machines: Soft margin
- Support vector machines: Soft margin with bolstered error estimation