Stars
Chai-1, SOTA model for biomolecular structure prediction
Official repository for Target-Specific De Novo Peptide Binder Design with DiffPepBuilder
Adapting protein language models for structure-conditioned design
Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)
Implementation for SE(3) diffusion model with application to protein backbone generation
Protein hallucination and inpainting with RoseTTAFold
PLMSearch enables accurate and fast homologous protein search with only sequences as input
Public RFDiffusionAA repo
De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds
Biological foundation modeling from molecular to genome scale
Tutorials, cheat sheets, and other resources for computational methods for protein design.
A generative model for programmable protein design
FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.
DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
Pytorch🍊🍉 is delicious, just eat it! 😋😋
Scripts for fine-tuning Meta Llama3 with composable FSDP & PEFT methods to cover single/multi-node GPUs. Supports default & custom datasets for applications such as summarization and Q&A. Supportin…
Utilities for interacting with the ModBase database