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Data quality assessment and metadata reporting for data frames and database tables
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
Fast ICD-10 and ICD-9 comorbidities, decoding and validation in R. NB use main instead of master for default branch.
A Collection of Helper Functions for the gt Package.
A package supporting the conversion from Synthea CSV to OMOP CDM
Clinical Natural Language Processing using spaCy, scispacy, and medspacy
Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://d…
This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.
An R package for computing comorbidity scores.
An R package that facilitates access to a variety of OMOP CDM sample data sets.
Prepare UK Biobank Electronic Health Record data for research
The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)
Pilot model and converter for integration of radiology data into OMOP-CDM
Develop a function to be incorporated into the R package 'icd' that will convert International Classification of Diseases codes from Ninth to Tenth revisions
R package: ICD-9 and ICD-10 code utility functions and datasets
An R package for generating analysis-ready data from laboratory records
Identifying relevant concepts from the OMOP CDM vocabularies
Data analysis produces data in the form of results. Although integrating and putting findings into context is a cornerstone of scientific work, data of this type is often neglected. The analysis r…
Transformation scripts for Inclivia's Abucasis EHR data | BigData@Heart consortium