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Notebooks used in scvi-tools tutorials

Jupyter Notebook 44 25 Updated Sep 30, 2024

UCI xiangqi engine

C++ 895 169 Updated Sep 29, 2024

Implement AlphaZero/AlphaGo Zero methods on Chinese chess.

Python 1,075 344 Updated Mar 24, 2023

Comparison of methods for trajectory inference on single-cell data 🥇

R 192 39 Updated Aug 30, 2023

A Deep Learning UCI-Chess Variant Engine written in C++ & Python 🦜

Jupyter Notebook 240 42 Updated Sep 24, 2024

MuZero

Python 2,475 607 Updated Sep 3, 2024

Data and software for building the ACL Anthology.

Python 413 281 Updated Sep 30, 2024

PainterEngine is a application/game engine with software renderer,PainterEngine can be transplanted to any platform that supports C

C 2,416 272 Updated Sep 12, 2024

围棋的各种变种形式,网页js实现

JavaScript 38 5 Updated Sep 19, 2023

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

Python 579 60 Updated Sep 25, 2024

Convert Jupyter Notebooks to Web Apps

Python 3,980 253 Updated Jul 8, 2024

Just use pyecharts to imitate Echarts official example.

HTML 1,185 585 Updated Apr 7, 2023

A Unified and Modular Framework to Incorporate Structural Dependency in Spatial Omics Data

Jupyter Notebook 5 2 Updated Jun 14, 2024
Jupyter Notebook 997 190 Updated Aug 1, 2024

Fast and memory-efficient exact attention

Python 13,600 1,245 Updated Sep 30, 2024

Source code and data for MuCST

Jupyter Notebook 2 Updated Jul 19, 2024
Jupyter Notebook 107 26 Updated Jun 10, 2022

Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

Python 310 57 Updated Aug 21, 2024

Cell2location paper - Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics

Jupyter Notebook 10 6 Updated Nov 26, 2022
Python 3 Updated Aug 13, 2023

Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcriptomics data presented in our associated manuscript.

R 17 4 Updated Jul 13, 2024

Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network

Python 98 18 Updated Jul 6, 2023

A causal implicit generative model for simulating single-cell RNA-seq data guided by a gene regulatory network 🧬

Python 22 3 Updated Aug 2, 2024

an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT data

Jupyter Notebook 15 1 Updated Jun 17, 2024

STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages

Jupyter Notebook 18 Updated Dec 26, 2023

STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.

Jupyter Notebook 28 5 Updated Apr 8, 2024

Source code of ST-SCSR

Jupyter Notebook 1 Updated Jul 30, 2024

Cell clustering for spatial transcriptomics data with graph neural network

Python 56 11 Updated Mar 31, 2023
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