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Using CIBERSORT to estimate Adipose Tissue cell type composition.

We present computationally estimated cell type proportions from two seperate cohorts: TwinsUK & The Genotype Tissue Expression Consortium (GTEx).

Cell estimates for GTEx and TwinsUK can be found in:

cohort_CellEstimates/

Code, figures and files for simulations can be found in:

simulations/

The signature matrix to use with CIBERSORT to perform the deconvolution can be found in:

SignatureMatrix/

Additionally, we provide all summary statistics for eQTL analysis adjusted for cell type proportions and GxCell interaction tests available here.

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Cell type estimation in bulk Adipose tissue RNA-seq

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