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Commits on Apr 23, 2018

• Reducing underlinking of kat lib. However, it is likely that testing will fail on Mac.

  

  Daniel Mapleson

  committedApr 23, 2018
  94c14d0

• Upping version to 2.4.2

  

  Daniel Mapleson

  committedApr 23, 2018
  b599296

• Ensuring tabulate is present for travis build.

  

  Daniel Mapleson

  committedApr 23, 2018
  d7bb9bd

• Forcing error if using python and required python modules are not present.

  

  Daniel Mapleson

  committedApr 23, 2018
  aea4a13

Commits on Apr 22, 2018

• Won't try to install PDFs by default

  maplesond

  committedApr 22, 2018
  3d17b25

• Ignoring boost site wide configuration file when installing boost.

  maplesond

  committedApr 22, 2018
  b1d8b8c

Commits on Apr 10, 2018

• Finish Release-2.4.1

  maplesond

  committedApr 10, 2018
  8606d51

• Updated distribution analysis docs.

  maplesond

  committedApr 10, 2018
  b92fa47

• Removing unused gnuplot functionality from library

  maplesond

  committedApr 10, 2018
  d299d8b

• configuration updates.

  maplesond

  committedApr 10, 2018
  b3d4b2d

• Updating version

  

  Daniel Mapleson

  committedApr 10, 2018
  a97930b

• Updating KAT docs

  

  Daniel Mapleson

  committedApr 10, 2018
  ccb95cd

• Fixing bug with spectra_mx plots

  

  Daniel Mapleson

  committedApr 10, 2018
  670887f

Commits on Mar 19, 2018

• Finish Hotfix-4

  maplesond

  committedMar 19, 2018
  4c714c5

• Finish Hotfix-4

  maplesond

  committedMar 19, 2018
  5e3c9ff

• Fixing bug with kat when run directly from src dir.

  maplesond

  committedMar 19, 2018
  b297a18

Commits on Mar 13, 2018

• Finish Hotfix-3

  maplesond

  committedMar 13, 2018
  0e8c490

• Finish Hotfix-3

  maplesond

  committedMar 13, 2018
  f7f95b1

• Adding in ability to control whether or not python scripts are installed via setup tools.

  maplesond

  committedMar 13, 2018
  d208993

• Finish Hotfix-2

  

  Daniel Mapleson

  committedMar 13, 2018
  93561fc

• Finish Hotfix-2

  

  Daniel Mapleson

  committedMar 13, 2018
  b6038b1

• Ensuring that any exceptions coming back from local optimisation are dealt with correctly.

  

  Daniel Mapleson

  committedMar 13, 2018
  2d84de7

• Finish Hotfix-1

  

  Daniel Mapleson

  committedMar 13, 2018
  84e6166

• Finish Hotfix-1

  

  Daniel Mapleson

  committedMar 13, 2018
  f0329f5

• For systems that have "python" meaning "python2", the previous configuration would have failed. We now explicitly search for "python3" when trying to find the python installation.

  

  Daniel Mapleson

  committedMar 13, 2018
  8095a67

• Finish Release-2.4.0

  

  Daniel Mapleson

  committedMar 13, 2018
  4667d0f

Commits on Mar 12, 2018

• Emit JSON directly from all relevant KAT tools.

  

  Daniel Mapleson

  committedMar 12, 2018
  7596b19

• Removing hom peak, est genome size and est het rate from sub spectras in spectra cn mx

  

  Daniel Mapleson

  committedMar 12, 2018
  281be80

• Dist analysis no emits a file called dist_analysis.json if output prefix is provided.

  

  Daniel Mapleson

  committedMar 12, 2018
  2a1a6fd

Commits on Mar 4, 2018

• Tidying up output from distanalysis

  maplesond

  committedMar 4, 2018
  b6d2226

• Putting in checks to ensure peaks exist before trying to calculate any stats.

  maplesond

  committedMar 4, 2018
  2e2e43d

• Make sure we check for existence of peaks before trying to find homozygous peak.

  maplesond

  committedMar 4, 2018
  4e00c72

• Ensure we compile for a 64-bit environment... probably not required but useful to make sure.

  maplesond

  committedMar 4, 2018
  b6f4ce9

Commits on Feb 28, 2018

• Fixing a couple of bugs and tweaking the parameters of the curve fitting logic.

  maplesond

  committedFeb 28, 2018
  976f157

Commits on Feb 21, 2018

• Updating documentation to add command necessary to install KAT via brew

  

  Daniel Mapleson

  committedFeb 21, 2018
  6843bed

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