add prep nisar

src/mintpy/cli/prep_nisar.py

@@ -0,0 +1,85 @@
+#!/usr/bin/env python
+############################################################
+# Program is part of MintPy                                #
+# Copyright (c) 2013, Zhang Yunjun, Heresh Fattahi         #
+# Author: Sara Mirzaee                                     #
+############################################################
+
+import sys
+import argparse
+
+from mintpy.utils import arg_utils
+
+############################################################
+EXAMPLE = """example:
+  python3 ./prep_nisar.py -i 'interferograms/stitched/*.h5' -d 'dem.tiff'  
+"""
+
+def _create_parser():
+    parser = argparse.ArgumentParser(
+        description="Prepare NISAR products for MintPy",
+        formatter_class=argparse.RawTextHelpFormatter,
+        epilog=EXAMPLE,
+    )
+
+    parser.add_argument(
+        "-i",
+        "--input-file-glob",
+        dest='input_glob',
+        type=str,
+        default="./interferograms/NISAR*.h5",
+        help="path pattern of NISAR interferograms (default: %(default)s).",
+    )
+
+    parser.add_argument(
+        "-d",
+        "--dem-file",
+        dest="dem_file",
+        type=str,
+        default="./dem.tif",
+        help="path to the DEM (default: %(default)s).",
+    )
+
+    parser.add_argument(
+        "-o",
+        "--out-dir",
+        dest="out_dir",
+        type=str,
+        default="./mintpy",
+        help="output directory (default: %(default)s).",
+    )
+
+    parser.add_argument(
+        '--force',
+        dest='update_mode',
+        action='store_false',
+        help='Force to overwrite all .rsc metadata files.'
+    )
+
+    parser = arg_utils.add_subset_argument(parser, geo=True)
+
+    return parser
+
+
+def cmd_line_parse(iargs=None):
+    """Create the command line parser."""
+    parser = _create_parser()
+    inps = parser.parse_args(args=iargs)
+
+    return inps
+
+####################################################################################
+def main(iargs=None):
+    # parse
+    inps = cmd_line_parse(iargs)
+
+    # import
+    from mintpy.prep_nisar import load_nisar
+
+    # run
+    load_nisar(inps)
+
+
+####################################################################################
+if __name__=="__main__":
+    main(sys.argv[1:])

src/mintpy/defaults/auto_path.py

@@ -102,13 +102,18 @@
 mintpy.load.waterMaskFile   = ../mask/watermask.msk
 '''
 
+AUTO_PATH_NISAR = '''##----------Default file path of NISAR products
+mintpy.load.unwFile         = ../interferograms/*.h5
+mintpy.load.demFile         = ../dem.tiff
+'''
 
 AUTO_PATH_DICT = {
     'isce_tops'     : AUTO_PATH_ISCE_TOPS,
     'isce_stripmap' : AUTO_PATH_ISCE_STRIPMAP,
     'roipac'        : AUTO_PATH_ROIPAC,
     'gamma'         : AUTO_PATH_GAMMA,
     'aria'          : AUTO_PATH_ARIA,
+    'nisar'         : AUTO_PATH_NISAR,
 }
 
 prefix = 'mintpy.load.'

src/mintpy/defaults/smallbaselineApp.cfg

@@ -26,7 +26,7 @@ mintpy.compute.config    = auto #[none / slurm / pbs / lsf ], auto for none (sam
 ## no   - save   0% disk usage, fast [default]
 ## lzf  - save ~57% disk usage, relative slow
 ## gzip - save ~62% disk usage, very slow [not recommend]
-mintpy.load.processor       = auto  #[isce, aria, hyp3, gmtsar, snap, gamma, roipac], auto for isce
+mintpy.load.processor       = auto  #[isce, aria, hyp3, gmtsar, snap, gamma, roipac, nisar], auto for isce
 mintpy.load.autoPath        = auto  #[yes / no], auto for no, use pre-defined auto path
 mintpy.load.updateMode      = auto  #[yes / no], auto for yes, skip re-loading if HDF5 files are complete
 mintpy.load.compression     = auto  #[gzip / lzf / no], auto for no.

src/mintpy/load_data.py

@@ -24,7 +24,7 @@
 from mintpy.utils import ptime, readfile, utils as ut
 
 #################################################################
-PROCESSOR_LIST = ['isce', 'aria', 'hyp3', 'gmtsar', 'snap', 'gamma', 'roipac', 'cosicorr']
+PROCESSOR_LIST = ['isce', 'aria', 'hyp3', 'gmtsar', 'snap', 'gamma', 'roipac', 'cosicorr', 'nisar']
 
 # primary observation dataset names
 OBS_DSET_NAMES = ['unwrapPhase', 'rangeOffset', 'azimuthOffset']
@@ -601,7 +601,6 @@ def run_or_skip(outFile, inObj, box, updateMode=True, xstep=1, ystep=1, geom_obj
 
 def prepare_metadata(iDict):
     """Prepare metadata via prep_{processor}.py scripts."""
-
     processor = iDict['processor']
     script_name = f'prep_{processor}.py'
     print('-'*50)
@@ -631,6 +630,18 @@ def prepare_metadata(iDict):
                 ut.print_command_line(script_name, iargs)
                 # run
                 prep_module.main(iargs)
+    elif processor == 'nisar':
+        dem_file = iDict['mintpy.load.demFile']
+        gunw_files = iDict['mintpy.load.unwFile']
+
+        # run prep_*.py
+        iargs = ['-i', gunw_files, '-d', dem_file, '-o', '../mintpy']
+        ut.print_command_line(script_name, iargs)
+        try:
+            prep_module.main(iargs)
+        except:
+            warnings.warn('prep_nisar.py failed. Assuming its result exists and continue...')
+
 
     elif processor == 'isce':
         from mintpy.utils import isce_utils, s1_utils
@@ -785,7 +796,7 @@ def load_data(inps):
     extraDict = get_extra_metadata(iDict)
 
     # skip data writing for aria as it is included in prep_aria
-    if iDict['processor'] == 'aria':
+    if iDict['processor'] in ['aria', 'nisar']:
         return
 
     ## 2. search & write data files