always shipping
π¨π΄ Bioinformatics Engineer at @mskcc
@papaemmelab
-
Memorial Sloan Kettering
- New York, USA
- https://twitter.com/juanesarango
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8
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written in R
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Haplotype-aware CNV analysis from single-cell RNA-seq
R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
An attempt to get an R runtime and function working on AWS Lambda using a container.
Absolute Copy Number Estimation using low-coverage whole genome sequencing data
Web app for automated, systematic, and integrated RNA-seq differential expression analysis
Molecular International Prognostic Scoring System IPSS-M for Myelodysplastic Syndromes
Tumour-in-Normal Contamination assessment with evolutionary theory.