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base repository: google-deepmind/alphafold
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base: main
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head repository: deisseroth-lab/alphafold
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compare: dlab-sherlock-multimer
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  • 7 commits
  • 7 files changed
  • 3 contributors

Commits on Jan 5, 2022

  1. Do not upgrade jax in Dockerfile 

    See:
#324
    @chrisroat
    chrisroat committed Jan 5, 2022
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  2. Mods to run on Sherlock SLURM the dlab way 

    - slurm launch script
- run_alphafold_dlab wrapper that can copy big input data locally
- env tweaks to run on Sherlock cluster
- Makefile for building singularity container
    @chrisroat
    chrisroat committed Jan 5, 2022
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  3. Update launch command in README 

    Run via repo checked out in GROUP_HOME
    @chrisroat
    chrisroat committed Jan 5, 2022
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Commits on Jan 6, 2022

  1. fixed typo in for is_prokaryote_list to work

    @avivko
    avivko committed Jan 6, 2022
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  2. another typo fix for is_prokaryote_list

    @avivko
    avivko committed Jan 6, 2022
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  3. Merge pull request #1 from avivko/dlab-sherlock-multimer 

    fixed typo for is_prokaryote_list to work
    @chrisroat
    chrisroat committed Jan 6, 2022
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Commits on Feb 8, 2023

  1. Update dcp command in README 

    Origin and destination paths for copying alphafold databases were flipped (should be FROM oak TO scratch).
    @eamonbyrne
    eamonbyrne committed Feb 8, 2023
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