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references.bib
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@article{vehtari2016,
title = {Practical Bayesian model evaluation using leave-one-out cross-validation and WAIC},
author = {Vehtari, Aki and Gelman, Andrew and Gabry, Jonah},
year = {2016},
month = {08},
date = {2016-08-30},
journal = {Statistics and Computing},
pages = {1413--1432},
volume = {27},
number = {5},
doi = {10.1007/s11222-016-9696-4},
url = {http://dx.doi.org/10.1007/s11222-016-9696-4},
langid = {en}
}
@article{baddeley2005,
title = {{\textbf{spatstat}}: An{\emph{R}}Package for Analyzing Spatial Point Patterns},
author = {Baddeley, Adrian and Turner, Rolf},
year = {2005},
date = {2005},
journal = {Journal of Statistical Software},
volume = {12},
number = {6},
doi = {10.18637/jss.v012.i06},
url = {http://dx.doi.org/10.18637/jss.v012.i06},
langid = {en}
}
@book{baddeley2015,
title = {Spatial Point Patterns},
author = {Baddeley, Adrian and Rubak, Ege and Turner, Rolf},
year = {2015},
month = {11},
date = {2015-11-11},
publisher = {Chapman and Hall/CRC},
doi = {10.1201/b19708},
url = {http://dx.doi.org/10.1201/b19708}
}
@article{spatstat,
title = {Spatial Point Patterns: Methodology and Applications with {\textbraceleft}R{\textbraceright}},
author = {Baddeley, Adrian and Rubak, Ege and Turner, Rolf},
year = {2015},
date = {2015},
url = {https://www.routledge.com/Spatial-Point-Patterns-Methodology-and-Applications-with-R/Baddeley-Rubak-Turner/9781482210200/}
}
@article{bankhead2017,
title = {QuPath: Open source software for digital pathology image analysis},
author = {Bankhead, Peter and Loughrey, Maurice B. and {Fernández}, {José A.} and Dombrowski, Yvonne and McArt, Darragh G. and Dunne, Philip D. and McQuaid, Stephen and Gray, Ronan T. and Murray, Liam J. and Coleman, Helen G. and James, Jacqueline A. and Salto-Tellez, Manuel and Hamilton, Peter W.},
year = {2017},
month = {12},
date = {2017-12},
journal = {Scientific Reports},
volume = {7},
number = {1},
doi = {10.1038/s41598-017-17204-5},
url = {http://dx.doi.org/10.1038/s41598-017-17204-5},
langid = {en}
}
@article{bürkner2017,
title = {{\textbf{brms}}: An {\emph{R}} Package for Bayesian Multilevel Models Using {\emph{Stan}}},
author = {{Bürkner}, Paul-Christian},
year = {2017},
date = {2017},
journal = {Journal of Statistical Software},
volume = {80},
number = {1},
doi = {10.18637/jss.v080.i01},
url = {http://dx.doi.org/10.18637/jss.v080.i01},
langid = {en}
}
@article{bürkner2018,
title = {Advanced Bayesian Multilevel Modeling with the R Package brms},
author = {{Bürkner}, Paul-Christian},
year = {2018},
date = {2018},
journal = {The R Journal},
pages = {395},
volume = {10},
number = {1},
doi = {10.32614/rj-2018-017},
url = {http://dx.doi.org/10.32614/RJ-2018-017},
langid = {en}
}
@article{brms,
title = {{\textbraceleft}brms{\textbraceright}: An {\textbraceleft}R{\textbraceright} Package for {\textbraceleft}Bayesian{\textbraceright} Multilevel Models Using {\textbraceleft}Stan{\textbraceright}},
author = {{Bürkner}, Paul-Christian},
year = {2017},
date = {2017},
volume = {80},
doi = {10.18637/jss.v080.i01}
}
@article{emmeans,
title = {emmeans: Estimated Marginal Means, aka Least-Squares Means},
author = {Lenth, Russell V.},
year = {2022},
date = {2022},
url = {https://CRAN.R-project.org/package=emmeans}
}
@article{brms-2,
title = {{\textbraceleft}brms{\textbraceright}: An {\textbraceleft}R{\textbraceright} Package for {\textbraceleft}Bayesian{\textbraceright} Multilevel Models Using {\textbraceleft}Stan{\textbraceright}},
author = {{Bürkner}, Paul-Christian},
year = {2017},
date = {2017},
volume = {80},
doi = {10.18637/jss.v080.i01}
}
@article{spatstat-2,
title = {Spatial Point Patterns: Methodology and Applications with {\textbraceleft}R{\textbraceright}},
author = {Baddeley, Adrian and Rubak, Ege and Turner, Rolf},
year = {2015},
date = {2015},
url = {https://www.routledge.com/Spatial-Point-Patterns-Methodology-and-Applications-with-R/Baddeley-Rubak-Turner/9781482210200/}
}
@article{spatstat-3,
title = {Spatial Point Patterns: Methodology and Applications with {\textbraceleft}R{\textbraceright}},
author = {Baddeley, Adrian and Rubak, Ege and Turner, Rolf},
year = {2015},
date = {2015},
url = {https://www.routledge.com/Spatial-Point-Patterns-Methodology-and-Applications-with-R/Baddeley-Rubak-Turner/9781482210200/}
}
@article{allen2021,
title = {Raincloud plots: a multi-platform tool for robust data visualization},
author = {Allen, Micah and Poggiali, Davide and Whitaker, Kirstie and Marshall, Tom Rhys and van Langen, Jordy and Kievit, Rogier A.},
year = {2021},
month = {01},
date = {2021-01-21},
journal = {Wellcome Open Research},
pages = {63},
volume = {4},
doi = {10.12688/wellcomeopenres.15191.2},
url = {http://dx.doi.org/10.12688/wellcomeopenres.15191.2},
langid = {en}
}
@article{bankhead2017a,
title = {QuPath: Open source software for digital pathology image analysis},
author = {Bankhead, Peter and Loughrey, Maurice B. and {Fernández}, {José A.} and Dombrowski, Yvonne and McArt, Darragh G. and Dunne, Philip D. and McQuaid, Stephen and Gray, Ronan T. and Murray, Liam J. and Coleman, Helen G. and James, Jacqueline A. and Salto-Tellez, Manuel and Hamilton, Peter W.},
year = {2017},
month = {12},
date = {2017-12-04},
journal = {Scientific Reports},
volume = {7},
number = {1},
doi = {10.1038/s41598-017-17204-5},
url = {http://dx.doi.org/10.1038/s41598-017-17204-5},
langid = {en}
}
@article{ggridges,
title = {ggridges: Ridgeline Plots in 'ggplot2'},
author = {Wilke, Claus O.},
year = {2022},
date = {2022},
url = {https://CRAN.R-project.org/package=ggridges}
}
@article{gelman2013,
title = {Understanding predictive information criteria for Bayesian models},
author = {Gelman, Andrew and Hwang, Jessica and Vehtari, Aki},
year = {2013},
month = {08},
date = {2013-08-20},
journal = {Statistics and Computing},
pages = {997--1016},
volume = {24},
number = {6},
doi = {10.1007/s11222-013-9416-2},
url = {http://dx.doi.org/10.1007/s11222-013-9416-2},
langid = {en}
}
@article{bayestestR,
title = {bayestestR: Describing Effects and their Uncertainty, Existence and Significance within the Bayesian Framework.},
author = {Makowski, Dominique and Ben-Shachar, Mattan S. and {Lüdecke}, Daniel},
year = {2019},
date = {2019},
pages = {1541},
volume = {4},
doi = {10.21105/joss.01541},
url = {https://joss.theoj.org/papers/10.21105/joss.01541}
}
@article{makowski2019,
title = {bayestestR: Describing Effects and their Uncertainty, Existence and Significance within the Bayesian Framework},
author = {Makowski, Dominique and Ben-Shachar, Mattan and {Lüdecke}, Daniel},
year = {2019},
month = {08},
date = {2019-08-13},
journal = {Journal of Open Source Software},
pages = {1541},
volume = {4},
number = {40},
doi = {10.21105/joss.01541},
url = {http://dx.doi.org/10.21105/joss.01541}
}
@article{ggdist,
title = {{\textbraceleft}ggdist{\textbraceright}: Visualizations of Distributions and Uncertainty},
author = {Kay, Matthew},
year = {2023},
date = {2023},
doi = {10.5281/zenodo.3879620},
url = {https://mjskay.github.io/ggdist/}
}
@article{patchwork,
title = {patchwork: The Composer of Plots},
author = {Pedersen, Thomas Lin},
year = {2022},
date = {2022},
url = {https://CRAN.R-project.org/package=patchwork}
}
@article{baddeley2019,
title = {Leverage and influence diagnostics for Gibbs spatial point processes},
author = {Baddeley, Adrian and Rubak, Ege and Turner, Rolf},
year = {2019},
month = {03},
date = {2019-03},
journal = {Spatial Statistics},
pages = {15--48},
volume = {29},
doi = {10.1016/j.spasta.2018.09.004},
url = {http://dx.doi.org/10.1016/j.spasta.2018.09.004},
langid = {en}
}
@article{raster,
title = {raster: Geographic Data Analysis and Modeling},
author = {Hijmans, Robert J.},
year = {2023},
date = {2023},
url = {https://CRAN.R-project.org/package=raster}
}
@article{geosphere,
title = {geosphere: Spherical Trigonometry},
author = {Hijmans, Robert J.},
year = {2022},
date = {2022},
url = {https://CRAN.R-project.org/package=geosphere}
}