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There is a bug in the get_ontology function related to MONDO where a cycle is detected. The error occurs within the ancs_from_pars function, causing the process to fail. This needs investigation and resolution.
Error message:
```
Error in ancs_from_pars(int.parse, int.child, is) :
Cycle detected in ontology! See ancestors of;
```
Tasks:
Investigate the root cause of the cycle detection issue in MONDO.
Implement a solution to handle cycles in the ontology structure gracefully.
Add tests to ensure cycles are handled properly in future.
Update documentation with any relevant details.
Rationale:
Fixing this bug is crucial to ensure that ontology-based functionalities work correctly without crashing due to cycles in the ontology.
The text was updated successfully, but these errors were encountered:
Description:
There is a bug in the
get_ontology
function related to MONDO where a cycle is detected. The error occurs within theancs_from_pars
function, causing the process to fail. This needs investigation and resolution.Error message:
```
Error in ancs_from_pars(int.parse, int.child, is) :
Cycle detected in ontology! See ancestors of;
```
Tasks:
Rationale:
Fixing this bug is crucial to ensure that ontology-based functionalities work correctly without crashing due to cycles in the ontology.
The text was updated successfully, but these errors were encountered: