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Commits on Nov 1, 2022

• 2.7.10b

  alexdobin

  committedNov 1, 2022
  9ec8b7e

Commits on Oct 20, 2022

• Ready for 2.7.10b

  alexdobin

  committedOct 20, 2022
  c6f8efc

• Rearranged collapseUMIall().

  alexdobin

  committedOct 20, 2022
  6f2442d

• renamed: SoloFeature_collapseUMIall_multiMappers.cpp -> SoloFeature_collapseUMIall.cpp

  alexdobin

  committedOct 20, 2022
  e1a0d39

Commits on Oct 19, 2022

• Reduced RAM usage for large STARsolo runs.

  alexdobin

  committedOct 19, 2022
  e7e8833

Commits on Sep 16, 2022

• Merge branch 'jeffhussmann-avoid_genome_collisions'

  alexdobin

  committedSep 16, 2022
  ee50484

• Merge branch 'avoid_genome_collisions' of https://github.com/jeffhussmann/STAR into jeffhussmann-avoid_genome_collisions

  alexdobin

  committedSep 16, 2022
  5c3681a

• Issue #1645: fixed rare seg-fault for --soloFeature SJ. Issue # 1650: added #include <sys/types.h> to SharedMemory.cpp to fix compilation issue on some systems.

  alexdobin

  committedSep 16, 2022
  5f9ad24

Commits on Aug 31, 2022

• Issue #719: implemented auto re-allocation of the SJ output buffer.

  alexdobin

  committedAug 31, 2022
  4ef655b

Commits on Aug 25, 2022

• Issue #1612: fixed the problem with Solo.out/SJ/raw/features.tsv sym-link.

  alexdobin

  committedAug 25, 2022
  85f957f

• Increased entropy of shmKey to avoid collisions between genomes.

  jeffhussmann

  committedAug 25, 2022
  4d762b9

Commits on Aug 18, 2022

• Bug-fix alpha: 2.7.10a_alpha_220818

  alexdobin

  committedAug 18, 2022
  5e8a99c

• Fixed potential seg-fault.

  alexdobin

  committedAug 18, 2022
  c0ea2f1

Commits on Aug 17, 2022

• #1619: fixed memory leak in SoloFeature_cellFiltering.cpp

  alexdobin

  committedAug 17, 2022
  f3f6d0f

Commits on Jun 1, 2022

• Bug-fix alpha: 2.7.10a_alpha_220601 : Issue #1543: Fixed a segfault occurring for STARsolo multimappers and large number of reads per cell.

  alexdobin

  committedJun 1, 2022
  c2f3c65

Commits on May 24, 2022

• Merge pull request #1550 from SoapGentoo/gcc-12-missing-include

  alexdobin

  committedMay 24, 2022
  3971d42

• Merge pull request #1510 from acblaumeiser/patch-1

  alexdobin

  committedMay 24, 2022
  a9f09b2

Commits on May 17, 2022

• Issue #1558: Fixed a bug with output of GX/GN BAM tags without CB/UB. Bug-fix alpha patch: 2.7.10a_alpha_220517

  alexdobin

  committedMay 17, 2022
  071e989

Commits on May 7, 2022

• Add missing #include <array> (GCC 12)

  SoapGentoo

  committedMay 7, 2022
  f5ad943

Commits on May 6, 2022

• Bug-fix alpha: 2.7.10a_alpha_220506

  alexdobin

  committedMay 6, 2022
  070b52e

Commits on Apr 13, 2022

• Fixed a bug with --soloMultiMappers for small number of cells cases. Issue #1513: If --soloMultiMappers options are not requested, output 'NoMulti' in the 'Reads Mapped to Gene: Unique+Multiple Gen…

  alexdobin

  committedApr 13, 2022
  03a5b8f

Commits on Mar 17, 2022

• Fixed a problem with CellReads.stats output for no-passlist runs.

  alexdobin

  committedMar 17, 2022
  f4d5de8

• Update README.md

  acblaumeiser

  committedMar 17, 2022
  c550562

Commits on Mar 14, 2022

• 2.7.10a_alpha_220314. Fixed another seg-fault issue.

  alexdobin

  committedMar 14, 2022
  3cd7185

Commits on Mar 8, 2022

• Fixed typo.

  alexdobin

  committedMar 8, 2022
  b4f8215

Commits on Feb 7, 2022

• 2.7.10a_alpha_220207

  alexdobin

  committedFeb 7, 2022
  ecec9ee

• Issue #1469: fixed seg-fault introduced in 2.7.10a; release: 2.7.10a_alpha_220207.

  alexdobin

  committedFeb 7, 2022
  c3b8fa1

Commits on Feb 1, 2022

• Fixed issues with documentation.

  alexdobin

  committedFeb 1, 2022
  fb84afe

Commits on Jan 15, 2022

• 2.7.10a

  alexdobin

  committedJan 15, 2022
  7f0f3f1

Commits on Jan 14, 2022

• Ready for 2.7.10a

  alexdobin

  committedJan 14, 2022
  51b64d4

Commits on Jan 13, 2022

• Fixed a bug in CB_samTagOut introduced by latest changes.

  alexdobin

  committedJan 13, 2022
  ae26add

• Fixed a bug in Velocyto introduced by latest changes.

  alexdobin

  committedJan 13, 2022
  990c301

Commits on Jan 12, 2022

• dev_ExonOverIntron_ReadStats_2021-01-12

  alexdobin

  committedJan 12, 2022
  1623bbf

• Merge branch 'assign_SA_to_correct_mate_when_mates_fully_overlap' of https://github.com/suhrig/STAR into dev_ExonOverIntron_ReadStats

  alexdobin

  committedJan 12, 2022
  93d38d9

• Finalized CellReads statistics output.

  alexdobin

  committedJan 12, 2022
  393d5ec

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